capture-recapture
There are 26 repositories under capture-recapture topic.
smithlabcode/preseq
Software for predicting library complexity and genome coverage in high-throughput sequencing.
mbjoseph/scr-stan
Spatial capture-recapture models in Stan
oliviergimenez/banana-book
Repo for a book on Bayesian capture-recapture w/ HMMs
HRDAG/verdata
Una herramienta para el uso y análisis de los datos de Conflicto armado en Colombia resultantes del proyecto conjunto JEP-CEV-HRDAG.
oliviergimenez/bayesian-cr-workshop
Material for a workshop on Bayesian analysis of capture-recapture data with hidden Markov models and Nimble
smithlabcode/preseqR
An R package for estimating library complexity
oliviergimenez/capture-recapture-review
material for a review on capture-recapture methods and questions
oliviergimenez/appendix_capturerecapture_review
Analyses, R code and data for review of 2009-2019 research on capture-recapture
oliviergimenez/bayesian-hmm-cr-workshop-valencia
Material for a workshop on Bayesian analysis of capture-recapture data with hidden Markov models and Nimble
oliviergimenez/social_networks_capture_recapture
Inferring animal social networks from capture-recapture data
OlivierBinette/dgaFast
Multiple Systems Estimation Using Decomposable Graphical Models. This is an efficient re-implementation and extension of the dga R package.
oliviergimenez/basics_spatial_capturerecapture
Simulating and fitting SCR models for closed and open populations
oliviergimenez/GammaGompertzCR
Fit Gamma-Gompertz model to capture-recapture data using data cloning
oliviergimenez/multieventRcpp
fitting multievent capture-recapture model with Rcpp
oliviergimenez/note-information-nombre-loups
Matériel pour l'estimation du nombre de loups en France.
oliviergimenez/pyrenean-brown-bear-abundance
Code and data for the estimation of Pyrenean brown bear abundance
busino/alob
Programm zum Wiedererkennen von Geburtshelferkröten
MurrayEfford/secrdesignapp
A Shiny app for designing spatially explicit capture–recapture studies
oliviergimenez/hmm_tmb
fitting multievent/hmm capture-recapture model with TMB
oliviergimenez/socialseals
R codes to reproduce analyses of our paper on a IPM for elephant seals
ezylstra/Zylstra_etal_2019_FreshwaterBiology
Zylstra, E. R., D. E. Swann, and R. J. Steidl. 2019. Surface-water availability governs survival of an amphibian in arid mountain streams. Freshwater Biology 64:164-174.
mbjoseph/secmr
A research compendium for: “Using visual encounter data to improve capture-recapture abundance estimates”
ncn-foreigners/singleRcapture-book
Single-source capture-recapture models using R
oliviergimenez/bayes-multistate-jollyseber
Fit JS model with Jags
oliviergimenez/mixed-bandrecovery-models
Fit band-recovery models with temporal random effects
oliviergimenez/simul_with_jags
Illustrate how to simulate data with Jags