collagen
There are 15 repositories under collagen topic.
ajinkya-kulkarni/PyHistology
Python package that uses colorspace-based segmentation to analyze histopathology images.
rgerum/saenopy
Semi-affine Elastic Network Optimizer to calculate forces in collagen or other biopolymer networks.
christophmark/jointforces
A Python package to conduct 3D Traction Force Microscopy on multicellular aggregates (spheroids).
woolfson-group/isambard
Intelligent System for Analysis, Model Building And Rational Design.
davidbhr/CompactionAnalyzer
Evaluates the fiber orientation and intensity around cells that compact collagen tissue as measure of contractile strength.
DanStromi/ShapeX-Collage
Shape Collage generator for Windows !
woolfson-group/ccbuilder2
A web application for atomistic modelling of coiled coils and collagens.
hodgesr2/Pan-Collagan-Ovarian-Cancer-Study-from-TCGA
MSDS Thesis - Pan-Collagen Survival Analysis of CNV in Ovarian Cancer
TCox-Lab/PicRed_Biref
ImageJ / FIJI script to analyse picrosirius red stained sections imaged under polarising light
NataliaKudr/SpeciesIdentification
Species identification based on mass spectrometry biomarker clustering
TCox-Lab/Collagen_Orientation
ImageJ / FIJI script to assess the orientation of collagen fibres in SHG images
FordeLab/AutoSmarTrace
Matlab based program for automatic chain tracing for AFM images of single molecule collagen, DNA, and other polymers.
FordeLab/SmarTrace
chain tracing program developed to analyze AFM images of single molecules
graeter-group/colbuilder
Building collagen fibrils from amino acids sequences
PiotrTymoszuk/collagen_pca
Expression, biological and clinical relevance of the collagen pathway genes in prostate carcinoma