cpg-islands

There are 9 repositories under cpg-islands topic.

ben-laufer/CGi
Takes output from DMRichR and performs statistical testing and visualization for CpG and genic annotation enrichments
Language:R5 1 11
mdraminski/CytoMeth
CytoMeth tool compiles a set of open source software named in the Roche pipeline guidelines to perform SeqCap Epi data analysis.
Language:R3 2 01
thierrygrimm/cpg-island-hmm
CpG island prediction with Hidden Markov Models, Viterbi and Baum-Welch algorithm
Language:Jupyter Notebook3 1 13
AlexanderSimWS/AutomatedBisulfiteAnalysis
A simple python script to find the amount of methylation after bisulfites sequencing from .fasta files
Language:Python1 1 00
frydaddy07/STICS-Portfolio
A portfolio of the work done during COMP 260 during S17 at Wesleyan University
Language:Python1 1 00
ksimicevic/hmm-CpG-islands
A project in Bioinformatics 2: detecting CpG islands using Hidden Markov Model.
Language:Jupyter Notebook0 2 00
shivChitinous/hmms
decoding, evaluating and learning HMMs from a bioinformatics perspective
Language:Jupyter Notebook0 1 00
soldatmat/cpg-islands
CpG-island Recognition
Language:Python0 1 00
tzpr/CgP-saarekkeet
Python ohjelmointia biotieteilijöille
Language:Python0 2 00