cross-species

There are 10 repositories under cross-species topic.

  • XingyanLiu/CAME

    Cell-type Assignment and Module Extraction based on a heterogeneous graph neural network.

    Language:Python124116

  • zhanglabtools/BrainAlign

    Code for "Whole brain alignment of spatial transcriptomics between humans and mice with BrainAlign"

    Language:Python10101

  • nhihin/aespca

    Code to reproduce Adaptive elastic-net sparse PCA for robust cross-species, cross-platform analysis of complex gene expression data in Alzheimer’s disease (Hin et al.)

    Language:R1101

  • Orthogonal-Research-Lab/Periodicity-in-the-Embryo

    100

  • anaellle/CrossSpeciesIC

    Cross-species integration of single cell RNA-seq data from the primary motor cortex between human, mouse and drosophila using expiMap and SATURN

    Language:Jupyter Notebook0100

  • asliuyar/translational-omics-AD

    This is the lesson repository for the Workshop on Computational Techniques and Resources for Effective Translational Research in Alzheimer's Disease.

    0200

  • Emad-COMBINE-lab/intrepppid

    Incorporating Triplet Error for Predicting PPIs using Deep Learning

    Language:Python0140

  • fhaive/metanalysis_toxicogenomic_data

    A gene regulation model reveals an ancestral adaptation response to particulate exposure triggered by nanomaterials

    Language:R0100

  • ytanaka-bio/cisMultiDeep

    Workflow to identify functional cis-regulatory regions for each annotated cell type

    Language:Python0100

  • altingia/mimeo

    Scan genomes for internally repeated sequences, elements which are repetitive in another species, or high-identity HGT candidate regions between species.

    Language:Python10