crosslinking
There are 14 repositories under crosslinking topic.
Rappsilber-Laboratory/xiRT
Multi-Dimensional Retention Time Prediction for Linear and Crosslinked Peptides
hgb-bin-proteomics/MSAnnika
MS Annika is a crosslink search engine based on MS Amanda, aimed at identifying crosslinks of cleavable and non-cleavable crosslinkers from MS2 and MS3 spectra.
hgb-bin-proteomics/MSAnnika_exporters
Export MS Annika crosslink results to different formats.
hgb-bin-proteomics/MaXLinker_extensions
Extensions for better usability of the cross-linking tool MaXLinker.
hgb-bin-proteomics/MSAnnika_CSM_Annotation
Calculates Intensities of Cross-linked Peptides from MS Annika CSMs.
hgb-bin-proteomics/Crosslink_Utils
Helper scripts for crosslink analysis.
hgb-bin-proteomics/MSAnnika_Extensions
List of all available extensions for our cross-linking search engine MS Annika.
hgb-bin-proteomics/MSAnnika_FDR
A script and functions to group and validate MS Annika results.
hgb-bin-proteomics/MSAnnika_MS3_Results
Results and Evaluation of the MS3 Search Algorithm of MS Annika.
hgb-bin-proteomics/MSAnnika_Spectral_Library_exporter
Generate a spectral library for Spectronaut from MS Annika results.
hgb-bin-proteomics/MSAnnika_Combine_Results
A script to merge and optionally validate several MS Annika search results.
hgb-bin-proteomics/MSAnnika_NC_Results
Repository containing scripts used for the analysis and visualization of the results of the MS Annika 3.0 non-cleavable crosslink search.
michabirklbauer/apmrs2022
Short Talk Presentation for APMRS 2022
michabirklbauer/apmrs2024
Short talk presentation, poster and abstract for APMRS-CEEPC 2024