cutandrun

There are 4 repositories under cutandrun topic.

  • nf-core/cutandrun

    Analysis pipeline for CUT&RUN and CUT&TAG experiments that includes QC, support for spike-ins, IgG controls, peak calling and downstream analysis.

    Language:Nextflow8415812448

  • RenneLab/CnR-flow

    CUT&RUN-Flow, A Nextflow pipeline for QC, tag trimming, normalization, and peak calling for data from CUT&RUN experiments.

    Language:Nextflow5364

  • stjude-biohackathon/ECLIPSE

    An R package for classifying, comparing, and investigating sub-region structural changes of (super) enhancers (or other large domains).

    Language:R2091

  • stjude-biohackathon/peakPeekeR

    Peak calling optimization via real time results assessment and interactive parameter adjustment.

    Language:R02240