cytoscape

There are 114 repositories under cytoscape topic.

  • network-science

    Language:Jupyter Notebook2

  • cytomcs

    A maximum common subgraph tool for Cytoscape

    Language:Java5

  • Cytoscape_2_Json

    We want to convert some cystoscape node-edge graph file (under pkl format) to JSON format file which can be used by other program.

    Language:Python4

  • omics-visualizer

    Omics Visualizer App for Cytoscape 3

    Language:Java4

  • Graph-DR

    Benchmarks of dimensionality reduction algorithms

    Language:Jupyter Notebook4

  • cytoscape-intermine

    Widget to allow intermine gene interactions to be viewed using cytoscape.js

    Language:JavaScript4

  • sap-hana-plugin-for-cytoscape

    Connect Cytoscape and SAP HANA to enable import, export and visualization of graph data stored in SAP HANA.

    Language:Java3

  • cyautoworkshop

    BioC Asia 2021 workshop "Cytoscape automation with RCy3"

    Language:Jupyter Notebook3

  • neo4j-ipycytoscape

    Demo of Neo4j graph visualization with the ipycytoscape Jupyter Lab extension

    Language:Jupyter Notebook3

  • EuBIC2020_Cytoscape

    Repository for workflows created during the Cytoscape hackathon at the EuBIC 2020 developer's meeting.

    Language:Jupyter Notebook3

  • cytoscape-dblclick

    Add dblclick event to cytoscape.js

    Language:HTML3

  • GrapholScape

    Web viewer for ontologies written in Graphol

    Language:JavaScript3

  • cyrest_competition

    Network data analysis using data from Youtube using Python + Cytoscape (CyREST)

    Language:HTML3

  • cxmateold

    A RESTFUL network API proxy service for network algorithms

    Language:Go3

  • GCModeller.Cytoscape

    GCModeller biological network visualization tools based on the Cytoscape

    Language:Visual Basic .NET3

  • aritree

    visualise your arithmetic expressions

    Language:TypeScript2

  • dash-cytoscape-elements

    Python object for dash-cytoscape elements

    Language:Python2

  • CodeNetVis

    An app for Cytoscape 3.9.1+ to visualize software dependency graph.

    Language:Java2

  • Network-map

    A network visualization tool/ web application to see potential risk in networks graph

    Language:JavaScript2
  • cyHANA

    cyHANA

    SAP HANA Plugin for Cytoscape

    2

  • pine

    A command line and GUI tool for visualizing protein-protein interaction networks.

    Language:Python2

  • Social-network-mining-and-analysis

    Mining Github for contributors at the Tensorflow repo and analysis of followship relations.

    Language:Jupyter Notebook2

  • MetroMap

    Interactive MetroMap for process/workflow descriptions

    Language:JavaScript2

  • LCR_Visualization

    LCR leader election algorithm visualization

    Language:HTML2

  • xresearch

    XPiratez Research Tree Viewer

    Language:JavaScript2

  • cxmate

    A RESTFUL network API proxy service for CX

    Language:Go2

  • genexpi

    Gene Network Inference from Expression Time Series

    Language:HTML2

  • IDARE

    IDARE - Multiomics Visualisation in Cytoscape

    Language:Java2

  • cy2sbml

    cy2sbml: SBML for Cytoscape 2

    Language:HTML2

  • Teslab

    Multipurpose syntactic analyzer

    Language:JavaScript1

  • parser

    Lojban parser with some slick visual representation

    Language:JavaScript1

  • cyto-snap

    Render graphs on the server side with Cytoscape.js, getting image file as output (using tauri)

    Language:JavaScript1

  • fedimap

    A simple utility to map out the social graph of ActivityPub instances

    Language:JavaScript1

  • rice-pilaf

    Published in GigaScience. Web app for post-GWAS/QTL analysis that performs a slew of novel bioinformatics analyses to cross-reference GWAS/QTL mapping results with a host of publicly available rice databases

    Language:Python1

  • cytoscape.js-supportimages

    A plugin that enables support images on cytoscape.js

    Language:JavaScript1

  • dash-bipartite

    Dash-Bipartite contains tools to create two columns graphs/bipartite graphs dash components.

    Language:Python1