dge-analysis

There are 7 repositories under dge-analysis topic.

  • bixBeta/DESeq2-shiny

    A shiny application to perform differential gene expression analysis of count data using DESeq2. The app also allows unsupervised exploration of data using PCA and hierarchical clustering.

    Language:R3203

  • Tenzin-Nyima-1/RiMod-FTD

    Scripts for the complete analysis pipeline: 1) generation of the count table; 2) annotation of the count-table and differential gene expression analysis; 3) Weighted Gene Coexpression Network Analysis; and, 4) the functional annotation (hypergeometric test) of the hits.

    Language:R1100

  • Aliama-Bi/Differencial-Gene-Analysis

    This study aims to figure out what is highly differentially expressed genes between Banff acute T-cell mediated rejection (TCMR) and normal kidney allograft biopsy specimens.

    Language:HTML0100

  • michalbukowski/rnaseq-pipeline-1

    Simple Snakemake RNA-Seq pipeline

    Language:Python0100

  • michalbukowski/rnaseq-pipeline-2

    Simple Nextflow RNA-Seq pipeline

    Language:Nextflow0100

  • Pg-Pi3Gey/ms-chikv-deg

    main Repository for my Master's Thesis work

    Language:R0100

  • noucel/RNAseq-DGE

    RNA-seq Differential Gene Expression (DGE) analysis comparing multiple dataset samples involves the comparison of gene expression levels across multiple samples with the possibliity to account for defined conditions, treatments, or groups.

    Language:R10