directed-evolution

There are 11 repositories under directed-evolution topic.

NREL/EvoProtGrad
Directed evolution of proteins in sequence space with gradients
Language:Jupyter Notebook68 8 88
tyang816/ProtSSN
Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2024).
Language:Python47 1 74
HySonLab/Directed_Evolution
Protein Design by Machine Learning guided Directed Evolution
Language:Python25 2 22
HySonLab/LatentDE
Latent-based Directed Evolution guided by Gradient Ascent for Protein Design
Language:Python24 1 10
tencent-quantum-lab/ODBO
Bayesian optimization with prescreening of search space via supervised outlier detection
Language:Python8 1 01
amlalejini/directed-digital-evolution
Computational model of laboratory directed evolution + experiments.
Language:Python3 2 01
HySonLab/LearnMMF
Learning to Solve Multiresolution Matrix Factorization by Manifold Optimization and Evolutionary Metaheuristics
Language:Roff1 1 0
soldatmat/DESilico.jl
Directed Evolution in Silico
Language:Julia1 1 10
florez-alberto/mock-fastq-generator
Generates randomly generated fastQ files from a template and upstream sequence.
Language:Python0 1 00
florez-alberto/top-variants
Calculates the probability of finding the top variant in a library of sequences.
Language:Python0 1 00
soldatmat/PELLM
Protein engineering with large language models
Language:Jupyter Notebook0 1 00