eccdna

There are 6 repositories under eccdna topic.

  • iprada/Circle-Map

    A method for circular DNA detection based on probabilistic mapping of ultrashort reads

    Language:Python6268320

  • nf-core/circdna

    Pipeline for the identification of extrachromosomal circular DNA (ecDNA) from Circle-seq, WGS, and ATAC-seq data that were generated from cancer and other eukaryotic cells.

    Language:Python281512314
  • ECCsplorer

    crimBubble/ECCsplorer

    The ECCsplorer is a bioinformatics pipeline for the automated detection of extrachromosomal circular DNA (eccDNA) from paired-end read data of amplified circular DNA.

    Language:Python181165

  • pierrj/ecc_caller

    ecc_caller is a pipeline designed to take Illumina NovaSeq paired end sequencing reads generated from isolated circular DNA and call eccDNA forming regions.

    Language:Python6113

  • leishenggit/CircleBase

    An integrated resource and analysis platform for human eccDNAs

    Language:HTML22

  • ParallelLight/eccdna

    The Repository for TeCD！

    Language:HTML