environmental-dna

There are 8 repositories under environmental-dna topic.

enormandeau/barque
eDNA metabarcoding pipeline
Language:Python30 4 66
Maine-eDNA/medna-metadata
An open-source data management system for tracking environmental DNA samples and metadata
Language:Python11 5 03
emmawahl/facepai
Scripts for executing a filtering, clustering and identification pipeline for eDNA samples.
Language:Shell6 1 00
NationalGenomicsCenter/eDNAssay
This repository contains scripts and data for training and utilizing machine learning classifiers to predict qPCR cross-amplification.
Language:R4 1 02
pierre-veron/eDNA-trawl
Comparison between eDNA and trawling for fish biodiversity metrics
Language:R4 1 00
Talitrus/bocas_eDNA
Environmental DNA survey captures patterns of fish and invertebrate diversity across a tropical seascape
Language:R3 3 00
billzt/MultiBarcodePipeline
Calculate optimal combination of eDNA barcodes based on amplicon sequences
Language:Python2 1 00
AGalanis97/Direct-shotgun-metagenomics-pub
Language:R0 0 00