epidemiology-analysis
There are 46 repositories under epidemiology-analysis topic.
ryansmcgee/seirsplus
Models of SEIRS epidemic dynamics with extensions, including network-structured populations, testing, contact tracing, and social distancing.
pzivich/zEpid
Epidemiology analysis package
p-j-r/covid-19
Stochastic SIR models; adding age-structures and social contact data for the spread of covid-19. Lattice model for identifying and isolating hotspots. This has been further developed into a network(graph) of multiple clusters(lattices) and tracing the infection in such a population.
metawards/MetaWards
MetaWards disease metapopulation analysis and modelling software. Professional geographical SIR model with a flexible plugin architecture to support complex scenario modelling
edoardottt/COVID-19
Info/Data (global/italy) about COVID-19. PR welcome for other countries.
epicollect/epi-collect
🌏🌎🌍 Liberate Google Takeout location data for epidemiological research and local contact tracing https://epi-collect.org
JoeRothwell/Molecular-epi
Data analysis for colorectal cancer projects, mainly using metabolomics data.
lt-shy-john/covid19-vaccine-game-theory
Game theoretical modelling of COVID-19 vaccine adoption
daniellybx/curso_r_asis
Curso Intermediário de R para análise de situação de saúde
AKU-CITRIC-Center-for-Bioinformatics/ncov
Genomic Epidemiology of SARS-CoV-2 in Pakistan
schongallam/firearms-and-MHP-public
Code for paper by Corbett, Schongalla, and Moen, about relationships between firearm ownership rates, mental health provider density, and firearm fatality rates.
doscsy12/network_sci_analysis
Network data analysis using networkx, and gephi for visualisations.
nunesma/Health-analytics
Data analysis focusing on health problems
scab-unam/dam_COVID-19
Data analysis and modeling of the COVID-19 propagation dynamics
ashm97/Gaussian-Processes-for-Fitting-Epi-Curves
Fitting GPs to count data for non-linear regression of epi-curves
daniellybx/bioest_aplicada_r
Repositório para o grupo de estudos R voltado para o R na área da Saúde.
ecsendmail/AgentBasedModel
CovidSIM Agent-Based Model
JoeRothwell/EPIC-metabolomics
Scripts for analysis of metabolomics data relating to nutrition, health and disease in the EPIC study.
Lauraquiroga/SEIRSModel
A SEIRS-NIMFA compartmental epidemiological model implementation adapted for the analysis of IoT network malware propagation
mlaviolet/tidyepi
Functions for epidemiology analysis, including direct and indirect adjustment
srhoffma/non_binary_exposure_IPW
Inverse probability weighting for non-binary exposures. Simple example in Excel and SAS.
ssiddhantsharma/simulate-epi
An epidemic stimulator, developed and built by brute force to learn more on biological systems.
tzxb018/covid_analysis
This python application takes the information from the spread of COVID-19 in the US and determines the effectiveness of the Stay At Home Orders for each state. To analyze the effectiveness, I used a cubic least square polynomial and the SIR model and compared these two models before and after date the stay at home orders were issued.
BlankTiger/SEIRD_model
Educational tool used to visualize and solve the SEIRD epidemiological model with vaccination functionality. Allows the user to save results, parameters and more.
BlankTiger/SIR_model
Educational tool that aims to provide an easy way of interacting with the basic epidemiological model SIR. Can also show how it would interact with the basic idea of vaccinations and an idea of losing immunity over time (second wave of infections).
daniellybx/curso_r_dados_temporais
Curso de nível intermediário aplicando o R e o RStudio ao cotidiano da Vigilância em Saúde para análise de dados temporais.
elynch21/Public-Health-490KR-Epidemiologic-Data-Management-and-Analysis
Undergraduate Course Work from Public Health 490KR Epidemiologic Data Management & Analysis, Taught by Professor Katherine W. Reeves, PhD, MPH
jonathanstathakis/epidemiology-statistical-analysis-report
A short EDA project on the results of a fictional trial of a HbA1c2 treatment. Written in R with tidyverse, table1, and other packages.
LinoSergio/COVID-19-mapping
Epidemiological project to visualize the status of COVID-19 in Sergipe (Brazil)
nicolas-ayala-aldana/Model-Risk
Ecological study for COVID-19 using aggregate data of Catalonia using RStudio
ruizdata/epi_navajo
Streamlined and reproducible code for generating daily reports on tribal COVID-19 risks
ste-tuf/isee-young-ws-reproducibility
Make your epidemiological research reproducible
stopsack/rifttable
rifttable: Results Tables to Bridge the Rift Between Epidemiologists and Their Data
Carlos-Ballon/COVID-19_DMII_ICA_Case-Control
⭕ Repository of a retrospective study of COVID-19 mortality in patients with type 2 diabetes
Carlos-Ballon/COVID-19_DMII_ICA_Cross-Sectional
⭕ Repository of a cross-sectional study of COVID-19 mortality in patients with type 2 diabetes