fungal

There are 10 repositories under fungal topic.

JTFouquier/ghost-tree
creating hybrid-gene phylogenetic trees for diversity analyses
Language:Python27 7 7820
everhartlab/sclerotinia-366
Analysis for "Population structure and phenotypic variation of *Sclerotinia sclerotiorum* from dry bean (*Phaseolus vulgaris*) in the United States"
Language:Shell11 3 176
broadinstitute/fungal-wdl
Broad fungal method repository
Language:WDL6 6 184
broadinstitute/funpipe
A python3 library for building best practice fungal genomic analysis pipeline
Language:HTML6 5 594
obophenotype/ascomycete-phenotype-ontology
Language:Shell4 9 53
dizak/mothulity
Easy-to-use tool facilitating work with Mothur.
Language:JavaScript3 2 983
AshrithSagar/Classification-Fungal10x
Fungal classification at 10x resolution. Multiple Instance Learning (MIL)
Language:Python1 3 00
akshayparopkari/discover_tfbs
Discover transcription factor (TF) binding specificities/sites (TFBS) using binding site motif sequence and structural information.
Language:Python0 1 10
iPsychonaut/FunDiSPipe
FunDiSPipe is a comprehensive bioinformatics pipeline designed for the Fungal Diversity Survey (FunDiS), specifically tailored for analyzing fungal ITS data from Oxford Nanopore Technologies sequencing.
Language:Python0 1 00
Sorrelsprout/shroombase
Mushroom Catalog
Language:HTML0 1 00