gene-signatures

There are 6 repositories under gene-signatures topic.

jackbibby1/SCPA
R package for pathway analysis in scRNA-seq data
Language:R62 2 656
cbg-ethz/scDEF
Deep exponential families for single-cell data.
Language:Python20 4 11
wejlab/TBSignatureProfiler
Profile RNA-seq data using published TB gene signatures
Language:R12 3 612
MayurDivate/DeepCancerSignatures
This repository contains code used to build and interpret a deep learning model. It is a DNN classifier trained using gene expression data (TCGA). Then is interpreted to identify cancer specific gene expression signatures.
Language:Jupyter Notebook9 2 13
vanallenlab/beanie
Tool for group biology estimation in single-cell RNAseq data
Language:Python5 6 11
marchionniLab/BiologicalConstraints
Using biological constraints to improve the performance of transcriptomic gene signatures
Language:R1 4 00