genome-informatics
There are 22 repositories under genome-informatics topic.
codecreatede/ml-expression-sequence
sequence and expression based machine learning
codecreatede/bcftools-utility
bactools-utility for dealing with bcf files
codecreatede/coding-plotter
plotting and summary tools for the protein to genome alignments for genome annotations.
codecreatede/domain-graphs
extracting and analyzing interpro domains for domain based graphs
codecreatede/expression-neural-network
fitting neural network on a unbalanced expression dataset
codecreatede/genome-annotation-viisualizer
viewing the plant, bacterial, fungal genome annotations.
codecreatede/genome-dataultilities
genome scale analysis using command bash
codecreatede/genome-estimates
estimates genomes size using the flow cytometry
codecreatede/go-nuc-iter
golang nuc-iteration
codecreatede/go-pacbiohifi-visualization
streaming visualization of pacbiohifi reads
codecreatede/langchain-application
a langchain literature miner from pubmed
codecreatede/metabolic-json
a metabolic json parser and streamlit for BIGG database
codecreatede/miniprot-protein-annotator
miniprot protein alignment analyzer
codecreatede/multi-view-genome-annotations
viewing the plant, bacterial, fungal multigene genome annotations.
codecreatede/pacbiohifi-awk
awk utilites for anlyzing pacbiohifi genomes and reads
codecreatede/paf-analyzer-awk
analyzing paf alignments using awk
codecreatede/pangenome-metagenomics
pangenome metagenomics normlization for specific ids
codecreatede/plant-resistance-gene-isolator
functional gene assembly of plant resistance genes
codecreatede/rust-genome-longread-count
datastructure rustlang faster iteration for genome, short and long reads
codecreatede/slurm-pbs-genome
slurm pbs based genome analysis utilities
codecreatede/tair-gff-ids-analyzer
ease of access gff files from tair for reading tair ids.
codecreatede/view-pacbiohifi-awk
pacbiohifi view using awk