glycosylation

There are 10 repositories under glycosylation topic.

  • glycosylator

    tlemmin/glycosylator

    Framework for the rapid modeling glycans and glycoproteins.

    Language:Rich Text Format282511
  • privateer

    glycojones/privateer

    The Swiss Army knife for carbohydrate structure validation, refinement and analysis

    Language:C++264459

  • Ojas-Singh/Re-Glyco

    The Python software re-glycosylates protein structures using MD simulation results from the glycoshape database. It takes alphafold protein structures as input and outputs modified structures with glycans added at appropriate sites.

    Language:Python9100

  • eliza-m/CrossSpeciesWorkflow

    CWL workflow that facilitate performing a series of structural and phenotype related third party prediction methods starting from either a protein FASTA file or a list of Uniprot IDs. Integrated prediction methods refer to secondary structure, solvent accessibility, disordered regions, PTS modifications (phosphorylation, glycosylation, lipid modification, sumoylation, etc).

    Language:Python5163

  • glycoinfo/GlyCovid

    Repository which is related to GlyCovid project.

    Language:Python2800

  • PedroSeber/O-GlcNAcylation_Prediction

    Code and datasets for the publication "Recurrent Neural Network-based Prediction of O-GlcNAcylation Sites in Mammalian Proteins"

    Language:Python2200

  • proteomicsyates/GlycoMSQuant

    This is a Java stand-alone tool for the quantitation of glyco sites. It calculates the proportion of different glyco-PTMs in a protein of interest. It supports data from IP2 (quant compare output files) and MaxQuant.

    Language:Java2330

  • Hendricks27/Glycan_hierarchical_relationship_viewer

    The JavaScript widget used to visualize the relationship among them

    Language:JavaScript1000

  • PedroSeber/CHO_N-glycosylation_prediction

    Code and datasets for the publication "Linear and Neural Network Models for Predicting N-glycosylation in Chinese Hamster Ovary Cells Based on B4GALT Levels"

    Language:Jupyter Notebook1200

  • glycoinfo/GlycanBind

    Repository which is related to GlycanBind project.

    Language:Python70