imaging-informatics
There are 27 repositories under imaging-informatics topic.
OHIF/Viewers
OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared extension packages
QIICR/dcmqi
dcmqi (DICOM for Quantitative Imaging) is a free, open source C++ library for conversion between imaging research formats and the standard DICOM representation for image analysis results
dcmjs-org/dicomweb-client
JavaScript client for DICOMweb RESTful services
OHIF/react-viewerbase
Core medical image viewer components built using React
bahanonu/imaging_tools
A table containing imaging analysis tools for biology, with a focus on calcium imaging.
SaravananSubramanian/dicom
This repository contains all the code that I have used in my DICOM articles on my blog (Java examples are included)
OHIF/VTKPlugin
OHIF Plugin for The Visualization Toolkit (VTK)
crowds-cure/cancer
Crowd-sourcing annotations of medical images to advance cancer research
SaravananSubramanian/dicomdotnet
This repository contains source code used in the DICOM programming using .NET/C# Tutorials
talkasab/anatomiclocations.org
Management of a curated set of common tags for anatomic locations for imaging informatics and a basic site describing the project.
CarragherLab/cptools2
Running cellprofiler on eddie3 / SGE clusters
statimagcoll/MultiplexedNormalization
R code and scripts to run the multiplexed imaging normalization methods, detailed in the "Quantifying and correcting slide-to-slide variation in multiplexed immunofluorescence images" paper.
DanuserLab/DeBias
DeBias decouples global bias from direct interactions in co-orientation and co-localization data.
GreatLakesSIIM/shiny-fhir
Experimenting with creating functionality similar to google forms with shiny apps and fhir
QIICR/dcmqi-guide
Learning materials for https://github.com/qiicr/dcmqi
GreatLakesSIIM/forms_on_fhir
attempts at a form interface for generating FHIR resources using C# or Python
mdvthu/report-templates
Radiology reporting templates
OHIF/OpenLayersPlugin
Example OHIF plugin based using OpenLayers
paoloinglese/DESI_MSI_recal
Companion code for the publication: Inglese, P., Huang, H., Wu, V., Lewis, M.R. and Takats, Z., 2021. Mass recalibration for desorption electrospray ionization mass spectrometry imaging using endogenous reference ions. biorXiv
preclinical-imaging/pixi-plugin
PIXI is an XNAT plugin designed to help manage and analyze preclinical imaging data.
LandonSwartz/SPIPware
SPIP software
pshwetank/pfca
Programming Framework for Clinical Image Analysis. Python library for MRI data processing.
ajitjohnson/IMAAP
Annotation and Analysis of Multiplexed Imaging Data
dilawar/jugnoo
ROI locatior in imaging data.