intron

There are 8 repositories under intron topic.

dputhier/pygtftk
A python package and a set of shell commands to handle GTF files
Language:Python49 5 1827
glarue/intronIC
Retrieve annotated intron sequences and classify them as minor (U12-type) or major (U2-type) using a support vector-machine model.
Language:Python8 1 30
casanova-lab/BPHunter
Genome-wide detection of human variants that disrupt intronic branchpoints
Language:Python6 2 21
intron-prediction-capstone/intron-utility
U12-type intron prediction and file parsing utility in modern C++
Language:C++5 3 70
HallemLab/Wild_Worm_Codon_Adapter
Shiny Web app for automatic codon optimization based on codon usage in Strongyloides species, Pristionchus species, Brugia malayi, as well as user-provided custom codon lookup tables
Language:R3 2 160
rwanwork/sam2irs
sam2irs is a program for calculating intron retention scores (IRS') using input in the sequence alignment/map (SAM) format.
Language:Perl2 2 43
nalaekaw/exon_intron
Deep neural network for splice sites prediction
Language:Jupyter Notebook1 1 02
bettycatherine/Intron-extraction
Intron extraction procedure
Language:Perl0 0 00