jbrowse-plugin
There are 16 repositories under jbrowse-plugin topic.
GMOD/Apollo
Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.
bhofmei/jbplugin-methylation
JBrowse plugin for methylation related things
bhofmei/jbplugin-smallrna
JBrowse plugin that supports smallRNA alignments
bhofmei/jbplugin-screenshot
JBrowse plugin that adds button which uses phantomJS to take browser screenshot
Arabidopsis-Information-Portal/ComboTrackSelector
Plugin to allow the co-existence of the Hierarchical and Faceted Track Selectors in the GMOD JBrowse Genome Browser
Arabidopsis-Information-Portal/SeqLighter
BioJS based Sequence Viewer plugin for the GMOD JBrowse genome browser
LincolnSteinLab/gdc-viewer
A JBrowse plugin for viewing GDC Data
AndraVasilache/jbrowse-plugin-ensembl-vep
Plugin for Jbrowse2 that fetches variant consequences with Ensembl Rest API and helps visualize the possible outcomes of the genome variants.
LincolnSteinLab/icgc-viewer
A JBrowse plugin for viewing ICGC Data
Arabidopsis-Information-Portal/CyverseRemoteTracks
JBrowse plugin enabling the ability to dynamically load tracks from data/configurations stored in the Cyverse Data Store
GMOD/jbrowse-plugin-quantseq
External JB2 plugin implementing a QuantitativeSequence track for displaying base-resolution models.
rishijatania/LetItWag
The app has a report stray animal form, wherein the user can mention the last spotted location of the pet. It is then upon the NGO administration to start a work flow to pickup the pet and later provide medical treatment for the pet. We also have feature to request for supplies for pets registered
Arabidopsis-Information-Portal/1001GenomesVariants
JBrowse plugin enabling the ability to enrich the 1001 Genomes Variants track with metadata from 1001genomes.org Master Accession List API
Arabidopsis-Information-Portal/AraportJBPlugin
Custom JBrowse plugin to map JBrowse/Store/SeqFeature/REST to the Araport Adama API endpoints
Arabidopsis-Information-Portal/EnsemblVariants
JBrowse plugin enabling the ability to enrich the Ensembl Variants (VCF) track with metadata from rest.ensemblgenomes.org API
bhofmei/jbplugin-nucdens
No longer actively developed...See README