local-alignment
There are 21 repositories under local-alignment topic.
kyu999/ssw_aligner
Python implementation of Striped Smith-Waterman Algorithm
bott0n/Needleman-Wunsch-Algorithm
Needleman-Wunsch Algorithm for global alignment and local alignment
jimmyliu1326/isPCR
Rapid local alignment search by in silico PCR
mgfzemor/Pairwise-sequence-Aligment-Tool
Pairwise Sequence Aligment Tool (PSAT) a simple application to align sequences.
Enescigdem/SequenceAlignment
Global and Local Sequence Alignment
CharliesCodes/bioinformatics
A compilation of all the programs in my bioinformatics course
meghanamadineni/sequenceAlignments
Sequence alignment methods implementation
Amirreza-Mousavi/Protein_Normalized_SW_Similarity_Score
An R script that calculates a similarity matrix for a list of protein sequences with the aid of Bleakley-Yamanishi Normalized Smith-Waterman Similarity Score.
mohmmedfathi/Alignment-Api
Local and Global Alignment API
YiqiaoSun/Transposon-insertion-site-identification
transposon insertion site identified from raw fastq file and transposon sequences, using local alignment for identification.
GennariAl/Smith-Waterman-with-R
I developed a R package implementing the Smith-Waterman algorithm. The package building, check and installation works smoothly with 0 error (see log_file). BiocCheck results show 1 error because I’m not registered at the support site, 1 warning because BiocViews terms are invalid. Check the log_file for more details.
gwirn/golaf
Fuzzy finder using Smith-Waterman algorithm
iamandreatonina/Algorithms_bioinformatics
:computer: Project for the course of Algorithms for Bioinformtics
Jomat18/Computacion-Molecular-Biologica
Algoritmos para el alineamiento de secuencias de ADN
olledejong/Sequence-Alignment
MSc Biology C++ Course Assignment. A program that can either perform a global, or local sequence alignment. Implementation of the Smith-Waterman and Needleman-Wunsch algorithms.
dieterich-lab/siteblast
Rapid and sensitive local alignment of genomic sequences employing motif anchors
kmein/fasta
Implementation of the FASTA algorithm from bioinformatics
UMCUGenetics/dtwExtended
Extensions for the dtw package in R
vinnik-dmitry07/protein-prediction
My assignments from Munich