maldi-msi
There are 11 repositories under maldi-msi topic.
novak-jiri/cyclobranch
A tool for mass spectrometry data analysis.
YonghuiDong/ShinyCardinal
Shiny App for Mass Spectrometry Imaging
paoloinglese/SPUTNIK
SPUTNIK R package
friendethan/SilverSpray_IMS
Script for analyzing intensity of olefin species from AgLDI IMS data. Uses MALDIquant, Cardinal and Tidyverse
gmrukwa/msi-preprocessing-pipeline
Default preprocessing pipeline for MSI data in raw ASCII format based on Gaussian Mixture Modeling (GMM)
paoloinglese/DESI_MSI_recal
Companion code for the publication: Inglese, P., Huang, H., Wu, V., Lewis, M.R. and Takats, Z., 2021. Mass recalibration for desorption electrospray ionization mass spectrometry imaging using endogenous reference ions. biorXiv
friendethan/FlyTubules_IMS
Script for unsupervised analysis of microdissected fly tubule phospholipid signals as well as fly sections. Uses Cardinal
friendethan/Gangliosides_IMS
Codes for analyzing the relative ganglioside intensities MS results of brain sections. Calculates total ion current using MALDIquant.
friendethan/Strawberry_IMS
Data analysis pipeline for strawberry imaging mass spectrometry data in Food Chemistry publication. Uses Cardinal, MALDIquant and Tidyverse
paoloinglese/tut_maldiquant_msi
Tutorial preprocessing MSI using MALDIquant