maldi-tof-ms
There are 16 repositories under maldi-tof-ms topic.
sgibb/MALDIquant
Quantitative Analysis of Mass Spectrometry Data
BorgwardtLab/maldi_amr
Code for the paper "Antimicrobial resistance prediction in clinical isolates through machine learning on MALDI-TOF mass spectra"
sgibb/readBrukerFlexData
Reads data files acquired by MALDI-TOF MS on Bruker Daltonics machines of the *flex series
LizzyParkerPannell/Untargeted_metabolomics_workflow
Collaborative workflow for untargeted metabolomics data processing and analysis using open-source tools. https://doi.org/10.3390/metabo13040463
OpenChrom/OpenTyper
MALDI-TOF MS interface for OpenChrom/ChemClipse
piplus2/SPUTNIK
SPUTNIK R package
aguerrerolopez/RMPrediction
Library that implements "Automatic antibiotic resistance prediction in Klebsiella pneumoniae based on MALDI-TOF mass spectra"
ClavelLab/maldipickr
Dereplicate And Cherry-pick Mass Spectrometry Spectra
friendethan/SilverSpray_IMS
Script for analyzing intensity of olefin species from AgLDI IMS data. Uses MALDIquant, Cardinal and Tidyverse
sing-group/S2P
S2P is an open source application for fast and easy processing of 2D-gel and MALDI-based mass spectrometry protein data.
friendethan/LipidMigration_IMS
R codes for plotting heatmap and line plots for MALDI TOF MS data from sublimated liver tissue. Uses MALDIquant and ggplot2
CeMOS-Mannheim/M2ara
M²ara, a R shiny web app for feature selection in cell-based assays.
CeMOS-Mannheim/MALDIcellassay
Detects high variance signals and generates dose-response curves to futher investigate candidate signals.
friendethan/FlyTubules_IMS
Script for unsupervised analysis of microdissected fly tubule phospholipid signals as well as fly sections. Uses Cardinal
friendethan/Gangliosides_IMS
Codes for analyzing the relative ganglioside intensities MS results of brain sections. Calculates total ion current using MALDIquant.
friendethan/Strawberry_IMS
Data analysis pipeline for strawberry imaging mass spectrometry data in Food Chemistry publication. Uses Cardinal, MALDIquant and Tidyverse