medline
There are 35 repositories under medline topic.
nikolamilosevic86/verifAI
VerifAI initiative to build open-source easy-to-deploy generative question-answering engine that can reference and verify answers for correctness (using posteriori model)
dhimmel/hsdn
Analysis of the human symptoms–disease network
suamin/MIL-RBERT
MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)
JuliaHealth/BioMedQuery.jl
Julia utilities for interacting with biomedical databases and biomedical application programming interfaces (APIs)
hetio/medline
Computing term cooccurrence in MEDLINE
esperr/search-workbench
Search Workbench is a tool for visually appraising, editing and comparing PubMed searches
hscells/groove
Query analysis pipeline framework
napsternxg/PubMed_SelfCitationAnalysis
Repository of our paper on Self-citation analysis in PubMed data
hscells/transmute
PubMed/Medline query transpiler
esperr/mesh-cat-graph
Chart the proportion of MeSH categories is a given PubMed results set
MedlineTranspose/medlinetranspose.github.io
Medline Transpose project
sahansera/medline-pubmed-extractor
A simple console application that will go through the Medline Pubmed dataset and extract out a given set of fields.
cornish/pubmed-eponyms
Python scripts for searching Pubmed using Biopython and working with eponymous terms
hscells/meshexp
Medical Subject Heading Exploder
JULIELab/costosys
The Corpus Storage System (CoStoSys) is a tool and abstraction layer for a PostgreSQL document database and part of the Jena Document Information System (JeDIS).
biodranik/bibutils
A fixed fork of bibutils from sourceforge to process pubmed PMC medline nbib files and convert them into Word Source.xml bibliography file
esperr/med-by-year
Small webservice to grab by-year counts for a PubMed search
esperr/mesh-subhead-graph
Chart the proportion of MeSH subheading in a given PubMed results set
hscells/boogie
DSL front-end for groove query analysis pipeline
lil-MoS/self
سورس بات سلف میدلاین
UniBioDicts/vsm-dictionary-pubmed
A VSM-dictionary that uses NCBI's E-utilities API to connect with the PubMed database
GeekDruggist/PubMedDataParser
A simple Python script for parsing selected data from PubMed-format files and saving it to a .csv file.
jromero132/bachelor_thesis_code
Code of my Bachelor Thesis in Computer Science at the University of Havana, Cuba.
klockwerkluka/searches
search history tracking
akshayonly/twohundredthousand-covid-19-literature
Data Mining and Analysis Approach to Understand Covid-19 through PubMed Bibliographic and other MEDLINE metadata.
aliazlanpro/gilgit
Translate complex search queries from PubMed or Ovid MEDLINE
hqcasanova/author-matrix
Tabular representation of author-to-author relationships in the Medline dataset
LucasReSilva/MEDLINE_Crawler
MEDLINE Crawler
esperr/medviz-baselines
Simple webservice that uses the NCBI API to grab baseline MEDLINE counts for geographically-tagged citations.
gpoulter/mscanner
(Archived) My M.Sc. Bioinformatics project, using Bayes classification with search engine tricks, to expand a list of Medline IDs (e.g. a citation list) with more relevant articles.
hashemi/refparser
Python 3 library for parsing academic references in RIS or MEDLINE formats
seandavi/map_to_mesh_with_mti
Use the MTI tooling from NCBI to map UMLS and MESH terms to arbitrary text.
shiva16/medline-json
Jan 2020 Medline json dataset, Description and image link.