micro-ct
There are 17 repositories under micro-ct topic.
je-santos/MPLBM-UT
Library for performing multiphase simulations (based on the Shan-Chen model) in complicated geometries (i.e. porous media 3D images)
Franjcf/hybridPorousInterFoam
OpenFOAM solver for performing single- and two-phase flow simulations on hybrid-scale porous media.
MIPT-Oulu/mCTSegmentation
Deep-Learning for Tidemark Segmentation in Human Osteochondral Tissues Imaged with Micro-computed Tomography
ImperialCollegeLondon/porefoam
Direct pore-scale simulation of single- and two-phase flow through confined media (alpha-release / experimental)
mizutanilab/RecView
Reconstruction and image processing of micro-CT/nano-CT data taken at SPring-8 and APS Argonne.
KitwareMedical/ITKIOScanco
ITK Image IO for Scanco MicroCT .ISQ files
NPPC-UK/microCT_grain_analyser
Software for processing output of Scanco uCT machines/ any ISQ or TIF producing machine, and producing data. See instructions.pdf for full explaination.
InsightSoftwareConsortium/ITKRingArtifact
ITK filters to reduce ring artifacts common in x-ray computed tomography.
mizutanilab/MCTrace
GUI-based neuronal network model building
martijnende/microTrack
A particle tracking library
PorousMedia/xray_to_pore_size_distribution
The notebook demonstrates the workflow for obtaining pore size distribution from binarized micro-CT images. The general principle involves identifying each pore, estimating the volume of each pore, and ultimately determining the radius of a sphere with an equivalent volume of each pore.
Peter-T-Ruehr/Adaptive_decoupling_insects
Code used to analyze adaptive decoupling in insects.
Peter-T-Ruehr/checkpoint_converter
Converts any image stack to a Stratovan Checkpoint file (*.ckpt) keeping specimen names and voxel sizes.
Peter-T-Ruehr/stack_cropping
ImageJ/Fiji macro that crops any given image stack without having to load it into memory first.
We-Gold/ouroboros
Extract ROIs (e.g. nerves, blood vessels) from multi-terabyte cloud-hosted medical scans.