mirna-seq
There are 14 repositories under mirna-seq topic.
eandresleon/miARma-seq
miARma-seq: a comprehensive tool for miRNA, mRNA and circRNA analysis
HuaZou/bioinformatics_pipeline
Bioinformatics Pipeline
sing-group/my-brain-seq
myBrain-Seq: a Compi pipeline for miRNA-Seq data analysis in neuropsychiatry
CCBR/Pipeliner
An open-source and scalable solution to NGS analysis powered by the NIH's Biowulf cluster.
hacktrackgnulinux/miranda
[Tools] miRanda: An miRNA target scanner that aims to predict mRNA targets for microRNAs using dynamic-programming alignment and thermodynamics
sivkri/small-RNA-Seq-Analysis
scripts and resources for performing miRNA sequencing analysis using tools like mirPRo and miRDeep2. Explore the code to process reads, map them to the genome, quantify known miRNAs, identify novel miRNAs, and browse the results
vivekruhela/miRSim
miRSim Synthetic Sequence Simulator
antoniogomez/UVIC_TFM_AGomez_2023
Scripts of Final Master Project
OpenOmics/mir-seek
An awesome microRNA-sequencing pipeline
bmunn99/Clemson-Grad-R-scripts
All the R scripts I used during my time as a grad student at Clemson University
jacopo-ronchi/MIRit
An open-source R package to comprehensively explore the role of impaired miRNA regulatory networks in complex biological conditions.
Mahsa-Ehsanifard/ceRNA-network
multiMiR package in R, providing gene-miRNA-lncRNA interactions for ceRNA network construction
th789/fflmediation
R package to predict gene feed forward loops using mediation analysis. Analyses integrate observed miRNA and mRNA expression data and database information on gene interactions.
systemPipeR/SPmirnaseq
Workflow Template