mirna-targets
There are 12 repositories under mirna-targets topic.
nf-core/circrna
circRNA quantification, differential expression analysis and miRNA target prediction of RNA-Seq data
TBradley27/FilTar
Using RNA-Seq data to improve microRNA target prediction accuracy in animals
jtremblay/MiRNATarget
A command line version of the psRNATarget workflow that predicts potential miRNA target locations on a genome.
zhangjunpeng411/miRSM
miRSM: Inferring miRNA sponge modules by integrating expression data and miRNA-target binding information
zhangjunpeng411/Scan
Scanning sample-specific miRNA regulation from bulk and single-cell RNA-sequencing data
YogiOnBioinformatics/Maternal-to-Zygotic-Transition-in-Xenopus-laevis
Research project undertaken in Computational Genomics at the University of Pittsburgh. with Dr. Miler Lee and students to understand Maternal-to-Zygotic transition in Xenopus laevis
Mahsa-Ehsanifard/ceRNA-network
multiMiR package in R, providing gene-miRNA-lncRNA interactions for ceRNA network construction
saysayani11/miRNA-RAB-network-analysis-in-human-diseases
Masters' thesis: Construction & analysis of miRNA-RAB sub-networks in human RAB associated disorders- A network biology approach
TBradley27/FilTarDB
Web application for accessing data generated by FilTar
abhik-99/Final-Year-Project
My Final Year Project - miRNA Target Prediction by adapting it to Next Sentance Prediction and assessing the performance of SOTA NLP architectures on the problem.
jvfe/miRminer
R package for retrieving miRNA data from the web
metamaden/PrImiR
Database of pairwise consensuses for miR-mRNA target interactions