mpileup

There are 5 repositories under mpileup topic.

  • TC-Hewitt/MuTrigo

    Pipeline for gene candidate discovery based on mutagenesis. Featured in gene cloning research published in Nature (DOIs: 10.1038/s41467-020-14937-2, 10.1038/s41467-021-23738-0, 10.1038/s41477-021-00971-5), Molecular Plant (DOI: 10.1016/j.molp.2021.05.010) and New Phytologist (DOI: 10.1111/nph.17075).

    Language:Python3000

  • y9c/cpup

    Convert mpileup format to base count tsv table

    Language:C++3110

  • vsoch/mpileup

    run the parse pileup perl script using Docker

    Language:Perl1301

  • adeschen/mpileupTools

    This python script parses a mpileup file to extract the coverage of each base at each position.

    Language:Python212

  • neil-n-zhang/fastpileup

    Run BAM file pileup using multithreads

    Language:Python