multi-omic-integration

There are 9 repositories under multi-omic-integration topic.

  • welch-lab/pyliger

    Python package for integrating and analyzing multiple single-cell datasets (A Python version of LIGER)

    Language:Jupyter Notebook263175

  • xinglab-ai/genomap

    Cartography of Genomic Interactions Enables Deep Analysis of Single-Cell Expression Data (Nature Communications, 2023)

    Language:Python12412

  • Shamir-Lab/INTEND

    INTEND (IntegratioN of Transcriptomic and EpigeNomic Data), a novel algorithm for integrating gene expression and DNA methylation datasets covering disjoint sets of samples

    Language:R8410

  • agugonrey/MOSS

    MOSS: Multi-Omic integration via Sparse Singular Decomposition

    Language:R7303

  • bhi-kimlab/neticspy

    Python implementation of NetICS (Network-based Integration of Multi-omics data).

    Language:Python1311

  • Cancer-Research-Project/NBS-KIRP-CNV

    Codebase and Data for the work on Network diffusion-based approach for survival prediction and identification of biomarkers using multi-omics data of Papillary Renal Cell Carcinoma

    Language:Jupyter Notebook1000

  • saifeldeen-bio/MultiOmics

    MOFA (Multi-Omics Factor Analysis) is a computational framework and statistical method designed for the integration and analysis of multi-omics data.

    Language:R0100

  • ScottCampit/emt-cobra

    Modeling the metabolic changes during the epithelial-to-mesenchymal transition.

    Language:HTML0000

  • llrs/thesis

    PhD thesis on data integration on inflammatory bowel disease

    Language:TeX312