multi-omics-integration

There are 7 repositories under multi-omics-integration topic.

  • cantinilab/Mowgli

    Single-cell multi-omics integration using Optimal Transport

    Language:Python373112

  • NPLinker/nplinker

    A python framework for data mining microbial natural products by integrating genomics and metabolomics data

    Language:Jupyter Notebook17610110

  • LamineTourelab/MOGONET

    MOGONET (Multi-Omics Graph cOnvolutional NETworks) is multi-omics data integrative analysis framework for classification tasks in biomedical applications.

    Language:Python12301

  • LamineTourelab/NetICS-multi-omics

    NetICS: network-based integration of multi-omics data for prioritizing cancer genes

    Language:MATLAB120

  • bshashikadze/diabetes-lung-omics-paper

    Reproducibility repo for Shashikadze et al. "Multi-omics profiling of lungs from genetically diabetic pigs reveals reduced ALOX15 levels and impaired eicosanoid switching as mechanisms contributing to a proinflammatory milieu".

    Language:Markdown0100

  • hannshu/stSCI

    Joint analysis single-cell and spatial transcriptomics data with stSCI

    Language:Python

  • Lin-Xu-lab/COSMOS

    COSMOS is a computational tool crafted to overcome the challenges associated with integrating spatially resolved multi-omics data. This software harnesses a graph neural network algorithm to deliver cutting-edge solutions for analyzing biological data that encompasses various omics types within a spatial framework.

    Language:Jupyter Notebook