multiplexed-imaging-analysis

There are 6 repositories under multiplexed-imaging-analysis topic.

  • huBioinfo/CytoCommunity

    A spatial omics data analysis tool that enables both unsupervised and supervised discovery of complex tissue cellular neighborhoods from cell phenotypes.

    Language:Python201812
  • HistoJS

    Mmasoud1/HistoJS

    HistoJS: Web-Based Analytical Tool for Multiplexed Images. Limited Github Online Demo 👇

    Language:JavaScript18100

  • anyuzx/HIPPS-DIMES

    Maximum Entropy Based HI-C/Distance Map - Polymer Physics - Structures Method

    Language:Jupyter Notebook11035

  • aalokpatwa/rasp-mibi

    Computational pipeline for multiplexed analysis of tumors.

    Language:Jupyter Notebook8112

  • deMirandaLab/PENGUIN

    Rapid and efficient image preprocessing pipeline for multiplexed spatial proteomics. Code to compare several techniques to denoise Imaging Mass cytometry

    Language:Jupyter Notebook2000

  • marta-seq/PENGUIN

    Rapid and efficient image preprocessing pipeline for multiplexed spatial proteomics. Code to compare several techniques to denoise Imaging Mass cytometry

    Language:Jupyter Notebook0101