nanopore-reads

There are 3 repositories under nanopore-reads topic.

  • RawHash

    CMU-SAFARI/RawHash

    RawHash can accurately and efficiently map raw nanopore signals to reference genomes of varying sizes (e.g., from viral to a human genomes) in real-time without basecalling. Described by Firtina et al. (published at https://academic.oup.com/bioinformatics/article/39/Supplement_1/i297/7210440).

    Language:C46895

  • ImagoXV/NanoASV

    NanoASV official repo

    Language:R52280

  • masikol/barapost

    Toolkit for binning FASTA, FASTQ and FAST5 files according to taxonomic annotation

    Language:Python5111