newick-format
There are 16 repositories under newick-format topic.
SimonGreenhill/treemaker
A Python library for creating a Newick formatted tree from a set of classification strings
arzwa/NewickTree.jl
Newick formatted (phylogenetic) trees
bioinfweb/TreeGraph2
A feature rich and easy to use phylogenetic tree editor
lindenb/newicktools
Misc tools for newick format
pdpolly/Phylogenetics-for-Mathematica
This add-in package for Mathematica performs basic phylogenetic functions, including reading and drawing Newick format trees, calculating phylogenetically independent contrasts, reconstructing ancestral values for continuous traits, performing random walks, and simulating continuous traits on phylogenetic trees.
leonardomathon/hierarchical-data-visualization-tool
This is our visualization project which was build for 2IOA0 DBL HTI + Webtech course (2017-2018) at the TU/Eindhoven.
jmbatto/singlelinkage
A package to process a pairwise distance matrix and cluster it with a single linkage algorithm
js51/newicktree
A LaTeX package developed by Geroge Savva which allows the drawing of phylogenetic trees from Newick format.
js51/SplitP
Python package that implements split- and rank-based tools for inferring phylogenies, such as flattenings and subflattenings.
RoanH/NGLTree
NGL Tree is a web application to visualise and explore datasets stored in the Newick file format.
SandraKla/NewickReader
Package for reading the Newick format
Karolea/maximum-agreement-subtree
Program resolving maximum agreement subtree problem.
Stepainpy/newick-converter
simple converter
EvolBioInf/midRoot
Midpoint Rooting of Phylogenies
hsiaoyi0504/phylocanvas_i5k
Try phylocanvas for i5k (https://hsiaoyi0504.github.io/phylocanvas_i5k/)
rauldengineer/Newick-Parser-for-COVID-19-Phylogenetic-Trees
Parser using Flex and Bison to recognize COVID-19 phylogenetic trees written in Newick format. It aims to determine the number of Spanish nodes, the count of those nodes that are leaves of the tree, and the height of these Spanish leaf node