nucleotide-sequence
There are 24 repositories under nucleotide-sequence topic.
epam/ketcher
Web-based molecule sketcher
aziele/pairwise-sequence-alignment
A Python module to calculate alignment between two sequences using EMBOSS' needle, stretcher, and water
sshen8/peglit
Automatically identify non-interfering nucleotide linkers between a pegRNA and 3' motif
tseemann/noary
🍣 🦐 A lightweight nucleotide bacterial ortholog clustering tool
manojmw/NetDNA-1.0
This is one of my first python scripts for a simple web-based tool that will generate basic information from the query DNA sequence.
dat-alpaca/Degenerate-Bases
The active development version of the degenerate bases algorithm.
Logan1x/Nucleotide-Sequence-generator
Random DNA 🧬 nucleotide generator and reverse compliment finder 🔬
mutalyzer/backtranslate
Protein to RNA reverse translation
rrbox/Nucleotide-Swift
Swift package for bioinformatics
0xnu/nwunsch
Needleman–Wunsch algorithm implementation in Go.
AstraBert/SupaSeqs
Basically BLAST, but written in PostgreSQL😉
Carmoruda/dna-sequence-generator
DNA or RNA complementary, reverse and reverse complementary sequences generator
myon-bioinformatics/search_seq_including_spaces
Narrowly, Find sequences including nucleotide(or amino acid) spacers (Broadly, you can find the speific sequences of front and back while ignoring the middle sequences), and Write the result of finding them to csv files.(Language: Python3.9)
shamseen/pngcat-client
API repo: https://github.com/shamseen/pngcat-api
tusharpandey003/FASTA-Sequence-Analysis-Web-App
Analysis of FASTA ,Protein,DNA sequence.
xiongQvQ/codon-recoder
Recode a DNA sequence to match a target amino‑acid sequence with the minimal number of nucleotide changes, preserving the reading frame. Includes a CLI and Python API.
0xnu/nwunsch_lua
Needleman–Wunsch algorithm implementation in Lua.
DanielSoenarto/bioturtle
a Python program to calculate GC content from fasta file
dansta0804/BIAP_website
BIAP - A website that serves as a tool to analyze biological data (nucleotide and aminoacid sequences) and provide biology-related information in one place.
hewillk/istring
Simple wrapper for std::basic_string<int8_t>.
abhijeetsingh1704/FilterByLength
Filter fasta sequences by length
bob-friedman/EvolCat-Python
A Python Suite for Evolutionary and Comparative Genomics
jnanadeepthiv/Variantis_Webserver
A webserver for calculating the transition/transversion mutation ratio from input nucleotide sequences.
madisonlondon/Nucleotide-Alignment
This program determines the optimal alignment of two nucleotide sequences using the Smith–Waterman algorithm. Optimality, of course, is determined by the values of the gap penalty g and the weight matrix (that lists all of the s(ai , bj )). Finally the program outputs the optimal similarity score along with the optimal alignment.