oligonucleotide
There are 21 repositories under oligonucleotide topic.
ggirelli/oligo-melting
Software to estimate oligonucleotide duplexes melting temperature. Includes state-of-the-art monovalent (e.g., Na+) and bivalent (Mg2+) ion correction, formamide (or general denaturant) correction, and melting curve estimation.
ggirelli/iFISH-probe-design
iFISH Probe Design: a Python3 package to build iFISH probes.
fallerlab/Ribo-ODDR
Ribo-seq focused Oligo Design pipeline for experiment-specific Depletion of Ribosomal RNAs
EricLarG4/OligoR
Software suite for oligonucleotide native MS data treatment
ggirelli/iFISH4U
Custom routes, pages and files for iFISH4U website.
ggirelli/ifpd2
ifpd2: a Python3.7+ package to build iFISH probes
Paradoxdruid/fealden
Tool for generating optimized nucleic acid biosensor sequences
nkvamaks/oligoshell_calc
Oligonucleotide Calculator
Technoculture/openoligo-firmware
An open-source platform for managing DNA synthesis processes.
iOLIGO/AnnoKit
Reference genome annotation file processing toolset
iOLIGO/ioligo
oligo format tools
iOLIGO/SeqBox
seq process tools box
napoleontsai/RNADigestCID
A tool for RNA mass spectrometry
rokzajc/intetra
Command-line oligonucleotide frequency analysis tool
scbirlab/ogilo
⛓️ Automating construction of oligo library sequences for oligo array synthesis.
sfilges/OligoAnalysis
Documents and scripts for analysis of oligonucleotide synthesis errors.
VSmedvedev/OligoTemplate
This software is used to automate workflow. It is used to compose a working protocol and calculate reagent for oligonucleotide synthesis.
decal/oligdna
:biohazard: Convert Oligonucleotides to Literal DNA Strand Sequences
ggirelli/kmermaid
K-Mer management tools
j-andrews7/ASOspotter
A simplistic Shiny app for observing mutation data.