orthologues

There are 8 repositories under orthologues topic.

  • ODiogoSilva/TriFusion

    Streamlining phylogenomic data gathering, processing and visualization

    Language:Python871029323

  • vinuesa/get_phylomarkers

    A pipeline to select optimal markers for microbial phylogenomics and species tree estimation using the multispecies coalescent and concatenation approaches

    Language:Perl514168

  • datasnakes/OrthoEvolution

    An easy to use and comprehensive python package which aids in the analysis and visualization of orthologous genes. 🐵

    Language:Python294644

  • guyleonard/orthomcl_tools

    A couple of tools I find indispensable for post orthomcl down-stream analysis.

    Language:Perl11264

  • V-Z/sondovac

    Sondovač is a script to create orthologous low-copy nuclear probes from transcriptome and genome skim data for target enrichment. For latest version check "releases".

    Language:TeX5463

  • ANSES-Ploufragan/SIGffRid

    Find two-boxes transcription factor binding sites (made for sigma factor binding sites) by comparing intergenic DNA regions upstream pairs of orthologous genes using statistical analyses

    Language:Perl2410

  • lauralwd/LAR_phylogeny_gungor-et-al-2020

    Phylogenetic tree of LAR and other PIP family enzymes as shown in Güngör et al. 2020. This repository details all code and intermediate files used.

    Language:Jupyter Notebook10

  • neuhofmo/RecBlast

    The local version of the RecBlast

    Language:Python30