phenopackets-v2

There are 8 repositories under phenopackets-v2 topic.

  • CNAG-Biomedical-Informatics/convert-pheno

    A software toolkit for the interconversion of standard data models for phenotypic data

    Language:Perl9321

  • BIH-CEI/ERKER2Phenopackets

    A pipeline of ERKER data into the phenopackets data structure.

    Language:Python401101

  • CNAG-Biomedical-Informatics/pheno-ranker

    Pheno-Ranker is a tool designed for performing semantic similarity analysis on phenotypic data structured in JSON format, such as Beacon v2 Models or Phenopackets v2.

    Language:Perl4101

  • CNAG-Biomedical-Informatics/pheno-ranker-ui

    The web ui (R-Shiny application) for Pheno-Ranker, a tool designed for performing semantic similarity analysis on phenotypic data structured in JSON format, such as Beacon v2 Models or Phenopackets v2

    Language:R2100

  • mrueda/beacon2-ri-tools

    Beacon v2 Reference Implementation (Data ingestion tools) - Actively maintained by the original author

    Language:Perl1100

  • mrueda/pheno-lens

    Visualize and Perform Data Analytics on Phenotypic and Clinical Data Stored in GA4GH Standards and Beyond

    1200

  • mrueda/pheno-search

    Streamlined Searching in GA4GH-Standard Phenotypic and Clinical Data Repositories and Beyond

    Language:Python1200

  • BIH-CEI/RareLink

    RareLink - A Rare Disease Interoperability Framework in REDCap to enable Registry Use, HL7 FHIR, and the GA4GH Phenopacket Schema

    Language:Jupyter Notebook030