phosphorylation

There are 10 repositories under phosphorylation topic.

  • jdrudolph/photon

    PHOsphoproteomic dissecTiOn using Networks

    Language:Python173405

  • KarrLab/bpforms

    Toolkit for concretely describing non-canonical DNA, RNA, and proteins

    Language:Python681092

  • eliza-m/CrossSpeciesWorkflow

    CWL workflow that facilitate performing a series of structural and phenotype related third party prediction methods starting from either a protein FASTA file or a list of Uniprot IDs. Integrated prediction methods refer to secondary structure, solvent accessibility, disordered regions, PTS modifications (phosphorylation, glycosylation, lipid modification, sumoylation, etc).

    Language:Python5163

  • frl21/Phosphorylation_Prediction

    This project is conduct research using deep learning to predict phosphorylation site in protein sequences

    Language:Jupyter Notebook5101

  • yxu132/prot2vec_contextualvec

    Model training for prot2vec-based phosphorylation site prediction

    Language:Python3101

  • mo-yoda/Drube_2021

    This code was written and used for statistical analysis and visualisation of data included in Drube et al. 2021.

    Language:R1100

  • Pathmanaban/Phospho_analysis

    Scripts used for the phosho data analysis

    Language:Jupyter Notebook1100

  • RafRomB/PhosphoFind

    PhosphoFind provides functions to identify phosphorylation positions (aminoacid number in proteins) in phosphoproteomics experiments.

    Language:R0100

  • tairsha/taxa-specific-substitution-matrix

    Algorithms for the generation of substitution matrices from intra-taxa variation data. Implemented and published on human genetic variation data.

    Language:Jupyter Notebook0001

  • CBFLivUni/Sulfo_Tyrosine

    Searching for Sulfotyrosines (sY) in a HA(pY)STACK

    Language:Python