phylogenetic-comparative-methods

pdpolly/Phylogenetics-for-Mathematica

This add-in package for Mathematica performs basic phylogenetic functions, including reading and drawing Newick format trees, calculating phylogenetically independent contrasts, reconstructing ancestral values for continuous traits, performing random walks, and simulating continuous traits on phylogenetic trees.

pedrohbraga/PhyloCompMethods-in-R-workshop

Workshop on Phylogenetic Comparative Methods using R instructed during the 2018 QCBS R Symposium

DoktorBotti/RF_Metrics

Library and command-line program calculating the generalized RF metrics; Used to compare phylogenetic trees.

helenamartg/Rana

This repository contains data and scripts to study phenotypic macroevolution and ecogeographical rules in Rana genus

mattiaghilardi/ReefFishIntestines

Data and code for Ghilardi et al. (2021) Phylogeny, body morphology, and trophic level shape intestinal traits in coral reef fishes. Ecology and Evolution

applicativesystem/go-alignment-proportion

golang for estimating the genome site proportion

fervillam/Bay-of-Phyllo-diets

fervillam/Comparative_Biology_2

A (not so) basic course of comparative biology.

jonnations/Pseudomys_body_size

Data and R scripts for the manuscript "Environment predicts repeated body size shifts in a recent radiation of Australian mammals"

LucasLegendre/fitEvolPar

Function to estimate evolutionary parameter in PGLS models using log-likelihood

NiklasHohmann/paradox_of_predictability

Supplementary code and data for "The paradox of predictability"

sridhar-halali/butterfly-diapause-evolution

Code and data for "Tempo and mode of diapause evolution in butterflies" Halali et al., 2024