plant-genomics

There are 8 repositories under plant-genomics topic.

simonorozcoarias/Inpactor2
Inpactor2: LTR retrotransposon detector and classificator using Deep Learning
Language:Jupyter Notebook23 2 54
almeidasilvaf/planttfhunter
An R package to identify plant transcription factors from protein sequence data and classify them in families
Language:R0 1 10
lauralwd/azolla_MYBs
Phylogeny and classification of Azolla filiculoides MYB genes
Language:HTML0 1 00
Orpowell/NLR-Assembler
NLR-Assembler is a command line tool for improving RenSeq Assemblies using linked-read sequencing by 10x Genomics.
Language:Python0 1 00
plantgenomes/plantgenomes.github.io
"植物基因组"(plantgenomes)微信公众号
0 2 00
almeidasilvaf/plant_transcriptomes
Data and code used in the Plant Genomes dashboard
Language:R1 0
codecreatede/plant-resistance-gene-miner
plant resistance gene miner for linking the resistance gene to genbank id.
Language:Python
lauralwd/LAR_phylogeny_gungor-et-al-2020
Phylogenetic tree of LAR and other PIP family enzymes as shown in Güngör et al. 2020. This repository details all code and intermediate files used.
Language:Jupyter Notebook1 0