positive-selection
There are 14 repositories under positive-selection topic.
robinvanderlee/positive-selection
Scripts and procedures for detecting positively selected genes and codons in primates
chasewnelson/OLGenie
Program for estimating dN/dS in overlapping genes (OLGs)
ctlab/GScour
Genome-wide detection of positive selection
KseniaJuravel/Positive-Selection-with-HYPHY
Simple code for PS detection, can be used on several files
ChrisCreevey/crann
Fast heuristic methods of detecting adaptive evolution in protein-coding genes.
stupornova33/parse_absREL_json
Parse output JSON files from the Hyphy AbsREL package for positive selection.
fadilla-wahyudi/finemav
This stand-alone program implements the Fine-Mapping of Adaptive Variation (FineMAV) statistic for detection of positively selected variants.
ainacolovila/PopHumanVar
PopHumanVar is an interactive app created with Shiny, that can be used for the functional characterization and prioritization of genomic variants
BaderLab/POPPATHR
Population-based pathway analysis of SNP-SNP coevolution
bguo068/ibdutils
A python package to facilitate identity-by-descent-based analysis
bguo068/posseleff_simulations
Nextflow pipeline to assess the impact of positive selection on Identity by Descent (IBD)-based inferences, utilizing population genetic simulations and true IBD inferences.
pegi3s/pss-fs
FastScreen: a Compi pipeline for Fast Screening of PSS (Positively Selected Sites).
sing-group/adops
Automatic Detection of Positively Selected Sites
sing-group/bpositive
B+ A database of Positively Selected Sites discovered with ADOPS