prophages

There are 6 repositories under prophages topic.

  • fmalmeida/bacannot

    Generic but comprehensive pipeline for prokaryotic genome annotation and interrogation with interactive reports and shiny app.

    Language:Nextflow984709

  • SushiLab/mVIRs

    Language:Python12354
  • WGCA

    icaromsc/WGCA

    JAMIRA is a reproducible Workflow for Integrative Exploration of Genomic Features of prokariotes

    Language:Python8212

  • jlmaier12/ProActive

    Detect elevations and gaps in read coverage on metagenome contigs or assembled genomes

    1100

  • Strong-Lab/Prophage_in_NTM

    This repository contains the data and methods for characterization of integrated prophages within different species of clinical non-tuberculous mycobacterial genomes

    Language:Jupyter Notebook1200

  • camilogarciabotero/PHASTER-DataProcessing-Scripts

    This repo hosts several scripts developed for data processing related to PHASTER outputs that will be included in the manuscript in preparation about Bacillus tequilensis genome

    Language:R10