protein-dna-interactions

There are 11 repositories under protein-dna-interactions topic.

lightdock/lightdock
Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
Language:Python314 12 6943
Bhattacharya-Lab/EquiPNAS
pLM-informed E(3) equivariant deep graph neural networks for protein-nucleic acid binding site prediction
Language:Python21 2 21
BEAM-Labs/CrossBind
Official Pytorch implementation of CrossBind: Collaborative Cross-Modal Identification of Protein Nucleic-Acid-Binding Residues.
Language:Python4 0 10
Kartik-Lakshmi/Genome_Editing_Trading_Cards
Meganucleases|ZFNs|TALENs|CRISPR-Cas|BaseEditors|PrimeEditor
4 2 00
draeger-lab/SABINE
Prediction of the binding specificity of transcription factors using support vector regression
Language:Java3 3 32
aqlaboratory/hth-dna-db
Database of HTH-DNA complexes
Language:Mathematica1 3 01
chaolinzhanglab/PlotPWM.jl
Plot position weight matrices (PWM)
Language:Julia1 1 1
jkmckenna/smftools
Single Molecule Footprinting Analysis in Python
Language:Python1 2 00
jkmckenna/smfplot
Python visualization of single locus SMF data
Language:Jupyter Notebook0 1 00
jmaurer0313/Jacks-Codes
Matlab, Bash and other codes
Language:MATLAB0 1 00
kchu25/SeqLogo.jl
Plot position weight matrices (PWM)
Language:Julia1 0