protein-fitness-prediction

There are 5 repositories under protein-fitness-prediction topic.

J-SNACKKB/FLIP
A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design
Language:Jupyter Notebook93 7 1114
lucidrains/tranception-pytorch
Implementation of Tranception, an attention network, paired with retrieval, that is SOTA for protein fitness prediction
Language:Python31 3 11
Protein-Engineering-Framework/PyPEF
PyPEF – Pythonic Protein Engineering Framework
Language:Python22 2 13
microsoft/protein-uq
Benchmarking uncertainty quantification methods on proteins.
Language:Shell18 10 03
niklases/PyPEF
PyPEF – Pythonic Protein Engineering Framework
Language:Python13 3 42