protein-stability
There are 16 repositories under protein-stability topic.
elaspic/elaspic2
Predicting the effect of mutations on protein stability and protein binding affinity using pretrained neural networks and a ranking objective function.
chaconlab/korpm
Predicting the effect of mutations on protein stability using a simple orientational potential.
mtplr/pyMol-cookbook
Some notes (cookbook) for pyMol. Protein Crystallography course.
sambitmishra0628/PSP-GNM
Prediction of protein thermodynamic stability changes upon mutations through a Gaussian Network Model simulating protein unfolding behavior
elaspic/elaspic
Predicting the effect of mutations on protein stability and protein-protein interaction affinity.
narodkebabci/gRoR
A workflow to get rid of redundant mutations
dohlee/abyssal-pytorch
Implementation of Abyssal, a deep neural network trained with a new "mega" dataset to predict the impact of an amino acid variant on protein stability.
dohlee/snakemake-cartesian-ddg
Snakemake pipeline for Rosetta 'cartesian-ddg' protocol for protein stability prediction upon mutations.
latticetower/stable-mutants
https://biohackathon.biolib.com/event/2021-protein-edition/ - team "house-of-mutants" - task "Predicting multi-mutant protein stability"
dohlee/rasp-pytorch
Reimplementation of RaSP, a deep neural network for rapid protein stability prediction, in PyTorch.
dacarlin/bglb_thermal
Large data set of thermal stabilities for mutants of BglB, and associated publication
n1ghtf4l1/mutating-doodle
Identify the thermostable mutations in enzymes
SPC-Facility-EMBL-Hamburg/circularDichroismApp
R shiny app to analyse circular dichroism data
SPC-Facility-EMBL-Hamburg/differentialScanningFluorimetryApps
Two R shiny apps developed for analyzing differential scanning fluorimetry (DSF) data. One for binding, and one for stability
bikman/fs-mutation-prediction
Official repository for the paper "Few-shot Prediction of the experimental functional measurements for proteins with single point mutations".
tancredi-end/Contact-potential-matrix-validation-for-DDG-prediction
calculating ddg of point-mutation using contact potentials