protein-structures

There are 9 repositories under protein-structures topic.

kuixu/awesome-cryoem
A collaborative list of awesome CryoEM (Cryo Electron Microscopy) resources.
133 9 035
pymodproject/pymod
PyMod 3 - sequence similarity searches, multiple sequence/structure alignments, and homology modeling within PyMOL.
Language:Python71 9 1218
HobnobMancer/cazy_webscraper
Web scraper to retrieve protein data catalogued by the CAZy, UniProt, NCBI, GTDB and PDB websites/databases.
Language:Python12 3 593
SergeiNikolenko/ImmunoPeptideDesigner
Automated generation of immunogenic peptides from protein structures and molecular docking analysis using AlphaFold2 and AutodockVina.
Language:Jupyter Notebook1 1 00
taherimo/kludo
Diffusion Kernel-based Graph Node Clustering for Protein Domain Assignment
Language:Python1 1 00
WeronikaJargielo/protein-interaction-finder
ProteinInteractionFinder (PIF) is a Java 11 library for determining interatomic interactions in protein structures, obtained from PDB (Protein Data Bank) files.
Language:Java1 1 00
annasu1225/Carl_Chr20_Analysis
Yale Gradute School module CBB752 final group project by Jiaqi Li, Keyi Li, and Anna Su.
Language:Jupyter Notebook0 1 00
raph333/Consensus-residue-contact-calculator
Identify residue contacts shared across all or most protein structures of a give protein family
Language:Python0 2 00
connyyu/find_PDBs
Using UniProt API, find all PDBs associated to the UniProt entry.
Language:Jupyter Notebook