psi-blast

There are 7 repositories under psi-blast topic.

  • mircare/Porter5

    Fast, state-of-the-art ab initio prediction of protein secondary structure in 3 and 8 classes

    Language:C++454168

  • mircare/Brewery

    State-of-the-art ab initio prediction of 1D protein structure annotations

    Language:C++14343

  • 784221489/DBP-PSSM

    DBP-PSSM

    Language:Python2001

  • nickcafferry/PSSpred

    PSSpred (Protein Secondary Structure prediction) is a simple neural network training algorithm for accurate protein secondary structure prediction. It first collects multiple sequence alignments using PSI-BLAST. Amino-acid frequence and log-odds data with Henikoff weights are then used to train secondary structure, separately, based on the Rumelhart error backpropagation method. The final secondary structure prediction result is a combination of 7 neural network predictors from different profile data and parameters. The program is freely downloadable at the bottom of this page.

    Language:Perl2103

  • d-wdj/KB8024

    [SU/VT17] KB8024 - Protein Predictor Project (SupervisedMachineLearning)

    Language:Python1100

  • kyungtaekLIM/PSI-BLASTexB

    PSI-BLAST with a new sequence weighting algorithm

    Language:C++1303

  • WangXueqing007/KB8024-Bioinformatics-Project

    Language:Python1100