pssm

There are 12 repositories under pssm topic.

DeepRank/Deeprank-GNN
Graph Network for protein-protein interface
Language:Python117 7 931
althonos/lightmotif
A lightweight platform-accelerated library for biological motif scanning using position weight matrices.
Language:Rust39 4 22
baliga-lab/sequencelogo.js
Simple Javascript library for motif rendering
Language:JavaScript9 2 03
zahrasalarian/Bioinformatics-Projects
Several small Bioinformatics projects implementing related algorithms, including Semi-Global alignment, Multiple Sequence Alignment using Star-Alignment, and MSA using PSSM profiles considering Gaps.
Language:Python9 1 00
autosome-ru/motif_benchmarks
Benchmarks collection for GRECO TFBS Benchmarking Initiative
Language:C3 4 00
gozsari/PSSMs-SwissProt
This repository contains the link for all Position Specific Scoring Matrices(PSSMs) of all protein in SwissProt(UniProtKB)
3 1 00
koualab/conodictor
ConoDictor predicts conopeptides superfamily using generalized profiles and hidden Markov models.
Language:Python2 4 42
d-wdj/KB8024
[SU/VT17] KB8024 - Protein Predictor Project (SupervisedMachineLearning)
Language:Python1 1 00
3dbionotes-community/3DCONS
Ruby on Rails web server
Language:JavaScript0 2 10
bioinsilico/3DCONS
Ruby on Rails web server
Language:JavaScript0 1 01
rokuz/GraphicsDemo
Deprecated: Framework to create graphics demos using Direct3D 11 and OpenGL 4+
Language:GLSL0 0 00
mingzhangyang/pssm-tools
A collection of tools for visualizing PSSM
Language:JavaScript2 0