pubmlst
There are 3 repositories under pubmlst topic.
iferres/MLSTar
An easy way of MLSTyping your genomes in R.
brueggemann-lab/pgl_cgmlst_2024
Repository for the pneumococcal cgMLST typing scheme (pneumococcal genome library)
Genomic-Medicine-Linkoping/JASEN
Epitypification pipeline for clinical NGS data. Written in NextFlow, Python & Bash.