qtl-mapping
There are 28 repositories under qtl-mapping topic.
YaoLab-Bioinfo/binQTL
QTL mapping with binmap data
lizhao007/DeepBSA
DeepBSA is a novel bulked segregant analysis (BSA) software for the dissection of complex traits.
gabrielgesteira/QTLpoly
R package for random-effect multiple QTL mapping in autopolyploids
colbyford/parEBEN
Parallel Implementations of the Empirical Bayesian Elastic Net Cross-Validation in R
ladyson1806/SerohijosLab-piQTL
GitHub Repository associated with the piQTL project (Mapping effects of genome-wide genetic variation to protein-protein interactions reveals molecular mechanisms of complex traits) [ Serohijos & Michnick Lab, Université de Montréal ]
alethere/mpQTL
github repository for R package mpQTL
bredeson/Dioscorea-alata-genomics
Code and data from the Bredeson, Lyons, et al. Dioscorea alata var. TDa95/00328 v2 genome and analysis manuscript.
fboehm/qtlbim
QTL Bayesian Interval Mapping
kentavv/mapmaker
MapMaker/Exp 3.0b and MapMaker/QTL 1.1, updated to add various improvements including multithreading
YaoLab-Bioinfo/binQTL.shiny
GUI for binQTL
antoniogomez/UVIC_TFM_AGomez_2023
Scripts of Final Master Project
czheluo/Polymap
Pipeline for polymap and QTL Mapping
ManuelDelpero/AIL_B6xBFMI
Analysis code for AIL B6xBFMI
ramesh8v/chad_db-BRIL
Wheat BRIL database created using FLASK server side, angularjs is heavily used at front end
villegar/MetaPipe
MetaPipe: A High-Performance Computing pipeline for QTL mapping of large metabolomic datasets
arunkumarramesh/Drosophila-genetic-mapping
To map Drosophila melanogaster gene region(s) containing resistance to infection by parasitic wasp Leptopilina boulardi.
Biometris/statgenMPP
See https://biometris.github.io/statgenMPP for a full description
danielalfonsetti/JAXSSP_Aging_Heart
Jackson Labs Summer Student Program 2018, Bar Harbor, ME. Statistically analyzing the effect of genetic diversity on the aging heart. Final paper: https://docs.google.com/document/d/1rkDRjnS6XhkFGk6EpzB4V24XqJdfN_JaM4vh5cc3iBA/edit
erisemberg/peanut-allergy
This repository contains data and code to reproduce analysis in the manuscript, "A mutation in Themis contributes to peanut-induced oral anaphylaxis in CC027 mice"
miguelalburo/Brassica-Report-R
Project for my module Big Data Biology.
ramesh8v/tools
Repository for genomic webapplications served from GitHub pages
ulrichga/Lfab_QTL
Analyses of my MSc Thesis: "Genetic architecture of parasitoid counteradaptation to symbiont-conferred resistance"
yassato/rNeighborQTL
To enable quantitative trait loci mapping of neighbor effects, this package extends a single-marker analysis to interval mapping.
zjwinn/Mapping-of-a-Novel-Major-Effect-Hessian-Fly-Partial-Resistance-Locus-in-Southern-SRWW-LA03136E71
Data repository for the paper of the same name.
zjwinn/Winn-Dissertation-Chapter-3
This is the public repository for information related to the thesis chapter of the same name as the title.
ftugberk/BSA-QTL-Mapping-Drosophila-Ananassae
BSA-QTL Mapping in Drosophila Ananassae
jlboat/hapmap_to_qtl2
Convert HapMap file into a useable R qtl2 genotype file
matmu/MouseFM
In-silico methods for finemapping of genetic regions in inbred mice