rarefaction

There are 9 repositories under rarefaction topic.

  • MoBiodiv/mobr

    Tools for analyzing changes in diversity across scales

    Language:R231312118

  • MoBiodiv/mobsim

    Spatial analysis and simulation of ecological communities

    Language:R2062814

  • valentinitnelav/bootstrapnet

    R package for bootstrapping indices of bipartite ecological networks

    Language:R52362

  • SioStef/panplots

    A small R script for generating pangenome accumulation curves

    Language:R2102

  • valentinitnelav/bootdissim

    R package for building turnover saturation curves via bootstrapping

    Language:R220

  • LMG9509/TFM

    Evaluación del impacto del proceso de rarefacción en la detección de comunidades microbianas en datos de amplicones ARNr 16S

    Language:R1100

  • bglarkin/efficient_intercepts

    Analysis of existing line-point-intercept data to learn whether fewer samples can return similar results

    Language:R0140

  • Scaketti/sasii

    SaSii is a R script for estimating genetic parameters from genotypic data for inferring sample size effects on genetic analysis. Applications of this package include planning the number of samples necessary to obtain robust population genetic estimates and evaluating if obtained sample size is large enough.

    Language:R0120

  • wfinsinger/rrarefy.record

    R function that resamples randomly and without replacement counts, and calculates rarefied richness (N0), diversity (N1, N2) and evenness (N2/N0) (after Hill (1973) and Birks et al. (2016))

    Language:R0100